PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100217740121
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 370aa    MW: 41352.4 Da    PI: 6.6494
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100217740121genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-17107156155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Ote100217740121|100217740121 107 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 156
                                   78*******************......55************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.96E-15107165IPR016177DNA-binding domain
PfamPF008474.0E-9107156IPR001471AP2/ERF domain
CDDcd000181.15E-11108163No hitNo description
PROSITE profilePS5103217.28108164IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-17108164IPR001471AP2/ERF domain
SMARTSM003801.9E-30108170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MFDLNLTLDS NGDDHFDADG WSRESSSNDD AVLAFNSDIS NSSDQAPIPS DSELVTRDLF  60
PVTRPGELDR CSEIQYSSPQ AAVQQELQQV QAVQARKSRR GPRSRSSQYR GVTFYRRTGR  120
WESHIWDCGK QVYLGGFDTA LAAARAYDRA AIKFRGVEAD INFNLNDYHD MKQMMNLSKE  180
EFVQTLRRQS NGFSRGSCKY RSVRWDARSG EHLGMKLISW HIPRVYDKAG VMCKGNEPVT  240
RFDPNTHDIG EATRHGTQHD LNLNLGMSAS SQNENGRLED SSKLNHVAQS STTSKLHMGS  300
NIIYDPPLEG VPTRFQHPYT AVNPNFAPNN EGMQGHDPTA QNTTAASSGF SSTPNTPTTY  360
SWINPYLPSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089376.16e-86PREDICTED: ethylene-responsive transcription factor RAP2-7-like
TrEMBLF6KQN56e-79F6KQN5_SOLLC; AP2 transcription factor SlAP2e
STRINGSolyc06g075510.2.16e-77(Solanum lycopersicum)